Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTNDIYFMTLAIEEAKKAAQLGEVPIGAIITKDDEVIARAHNLRETLQQPTAHAEHIAIERAAKVLGSWRLEGCTLYVTLEPCVMCAGTIVMSRIPRVVYGADDPKGGCSGSLMNLLQQSNFNHRAIVDKGVLKEACSTLLTTFFKNLRANKKSTN
2A8N Chain:B ((4-141))
---RTHFMELALVEARSAGERDEVPIGAVLVLDGRVIARSGNRTRELNDVTAHAEIAVIRMACEALGQERLPGADLYVTLEPCTMCAAAISFARIRRLYYGAQDPKGGAVESGVRFFSQPTCHHAPDVYSGLAESESAEIL---------------
General information:
TITO was launched using:
RESULT:
Template:
2A8N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -99837 for 1220 contacts (-81.8/contact) +
2D Compatibility (PS) -15214 + (NN) -9265 + (LL) 944
1D Compatibility (HY) -8000 + (ID) 3050
Total energy: -134422.0 ( -110.18 by residue)
QMean score : 0.491
(partial model without unconserved sides chains):
PDB file :
Tito_2A8N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2A8N-query.scw
PDB file :
Tito_Scwrl_2A8N.pdb
: