Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAIVNKVIIVEGKSDKKRVQQVIAEPVNIICTHGT-MSIDKLDDMIESLYDKQVFVLADSDDEGDRIRNWFKRYLS-------ESEHIFIDKTYCQ----VANCPKQYLAHVLSKHGFTCKKETPLLPNINNERLVLVNE
1DD9 Chain:A ((162-274))
--EPNRLLVVEGYMDVVALAQYGIN--YAVASLG-STTADHIQLLFRAT--NNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPD-GEDPDTLVRKEGKEAFEARMEQAMPLS--------------------
General information:
TITO was launched using:
RESULT:
Template:
1DD9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49701 for 661 contacts (-75.2/contact) +
2D Compatibility (PS) -11195 + (NN) -4109 + (LL) 1808
1D Compatibility (HY) 0 + (ID) 750
Total energy: -63947.0 ( -96.74 by residue)
QMean score : 0.512
(partial model without unconserved sides chains):
PDB file :
Tito_1DD9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DD9-query.scw
PDB file :
Tito_Scwrl_1DD9.pdb
: