Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEFREQVLNLLAEVAENDIVKENPDVEIFEEGIIDSFQTVGLLLEIQNKLDIEVSIMDF--DRDEWATPNKIVEALEELR
1DV5 Chain:A ((7-80))
---KNGVLDILADLTGSDDVKKNLDLNLFETGLLDSMGTVQLLLELQSQFGVDAPVSEFDRKE--WDTPNKIIAKVEQA-
General information:
TITO was launched using:
RESULT:
Template:
1DV5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50318 for 495 contacts (-101.7/contact) +
2D Compatibility (PS) -7408 + (NN) -2836 + (LL) 572
1D Compatibility (HY) -8400 + (ID) 1450
Total energy: -69840.0 ( -141.09 by residue)
QMean score : 0.512
(partial model without unconserved sides chains):
PDB file :
Tito_1DV5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DV5-query.scw
PDB file :
Tito_Scwrl_1DV5.pdb
: