Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVTLFTSPSCTSCRKAKAWLQEHDIPYTERNIFSEHLTIDEIKQILKMTED-GTDEIISTRSKTYQKLNVDIDSLPLQDLYSIIQDNPGLLRRPIILDNKRLQVGYNEDEIRRFLPRKVRTFQLQEAQRMVD
3F0I Chain:A ((5-119))
SVVIYHNPKCSKSRETLALLENQGIAPQVIKYLETSPSVEELKRLYQQLGLNEVRAMMRCKEELYKELNLGDSQLSDDALFAAMAEHPKLIERPIVVCNGQARHGRPPEQVLEIL-----------------
General information:
TITO was launched using:
RESULT:
Template:
3F0I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66374 for 864 contacts (-76.8/contact) +
2D Compatibility (PS) -12228 + (NN) -4839 + (LL) 1708
1D Compatibility (HY) -7600 + (ID) 1100
Total energy: -90433.0 ( -104.67 by residue)
QMean score : 0.648
(partial model without unconserved sides chains):
PDB file :
Tito_3F0I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F0I-query.scw
PDB file :
Tito_Scwrl_3F0I.pdb
: