Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVKIAIFASGSGSNFENIVEHVESGKLENIEVTALYTDHQNAFCIDRAKKHDIPVYINEPKQFDSKAAYEQHLVTLLNKDKVEWIILAGYMRLIGPDLLASFEGKILNIHPSLLPKYKGIDAIGQAYHSGDTITGSTVHYVDCGMDTGEIIEQRQCDIRPDDSKEQLEEKVKKLEYELYPSVIAKIVK
1CDE Chain:C ((1-182))
-MNIVVLISGNGSNLQAIIDACKTNKIKGT-VRAVFSNKADAFGLERARQAGIATHTLIASAFDSREAYDRELIHEIDMYAPDVVVLAGFMRILSPAFVSHYAGRLLNIHPSLLPKYPGLHTHRQALENGDEEHGTSVHFVTDELDGGPVILQAKVPVFAGDSEDDITARVQTQEHAIYPLVIS----
General information:
TITO was launched using:
RESULT:
Template:
1CDE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -114700 for 1448 contacts (-79.2/contact) +
2D Compatibility (PS) -20167 + (NN) -15716 + (LL) 836
1D Compatibility (HY) -16400 + (ID) 3000
Total energy: -169147.0 ( -116.81 by residue)
QMean score : 0.536
(partial model without unconserved sides chains):
PDB file :
Tito_1CDE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1CDE-query.scw
PDB file :
Tito_Scwrl_1CDE.pdb
: