Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRIIKYLTILVISVVILTSCQSSSSQESTKSGEFRIVPTTVALTMTLDKLDLPIVGKPTSY-KTLPNR------YKDVPEIGQPMEPNVEAVKKLKPTHVLSVSTIK---DEMQPFYKQLNMKGYFYDFDSLKGMQKSITQLGDQFNRKAQAKELNDHLNSVKQKIENKAAKQKKHPKVLILMGV-PGSY-LVATDKSYIGDLVKIAGGENVIKVK--------DRQYISSNTENLLNINPDIILRLPHGMPEEVKKMFQKEFKQNDIWKHFKAVKNNHVYDLEEVPFGITANVDADKAMTQLYDLFYKDKK |
| 3R5T Chain:A ((18-290)) | ---------------------------TIPSQPKRILSTAVTVTGTLLAIDAPVIASAATTQSTFFEQWRKLAELRQVKKLWPAGSVDLESVYVEQPDLIVVSMIGADSARDQIPLLQA-IAPTILVDYS-DQTWQSLAQQLGLATGLEEQAERTIHNFEQWTKQVRDVL-DL-PKGRANIVSYHGPGVVNAVAKAQSAHAQLLQSVGVVLEEPDPAWQAGSIVHRDFLRIHYEHLTQLQAETTFLITMTDQ------QAQAFLHDPILKNLPSIQRKQVYGLGENSFR-IDLFSAREIINSLLRRFAGEQ- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3R5T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -56319 for 2066 contacts (-27.3/contact) +
2D Compatibility (PS) -27081 + (NN) -14380 + (LL) 4284
1D Compatibility (HY) -8000 + (ID) 2250
Total energy: -103746.0 ( -50.22 by residue)
QMean score : 0.479
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