Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTILAEIVKYKQSLLQNGYYQDKLNTLKSVKIQNKKSFINAIEKEPKLAIIAEIKSKSPTVNDLPERDLSQQISDYEKYGANAVSILTDEKYFGGSFERLQALTTKTTLPVLCKDFIIDPLQIDVAKQAGASMILLIVNILSDKQLKDLYNYAISQNLEVLIEVHDRHELERAYKVNAKLIGVNNRDLKRFVTNVEHTNTILENKKPNHHYISESGIHDASDVRKILHSGIDGLLIGEALMRCDNLSEFLPQLKMQKVKS
3UXD Chain:A ((47-238))
------------------------------------------------AIIAVYKRKSPSGLDV-ERDPIEYAKFMERYAVGLV-ILTEEKYFNGSYEDLRKIASSVSIPILMWDFIVKESQIDDAYNLGADTVGLIVKILTERELESLLEYARSYGMEPAIVINDEEDLDIALRIGARIIIISSRDLETLEINKENQRKLISMIPSNVVKVAASGISERNEIEELRKLGVNAFEIGSSLMR------------------
General information:
TITO was launched using:
RESULT:
Template:
3UXD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -105403 for 1559 contacts (-67.6/contact) +
2D Compatibility (PS) -20684 + (NN) -7271 + (LL) 5176
1D Compatibility (HY) -15600 + (ID) 3450
Total energy: -147232.0 ( -94.44 by residue)
QMean score : 0.505
(partial model without unconserved sides chains):
PDB file :
Tito_3UXD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UXD-query.scw
PDB file :
Tito_Scwrl_3UXD.pdb
: