Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNYLESLYWIHERTKFGIKPGVKRMEWMLAQFNNPQNNIKGIHVGGTNGKGSTVAYLRTALVENGYEVGTFTSPFIETFNERISLNGVPISNDAIVELVSRIKPVSEMMERETDLGVATEFEIITAMMFLYFGEIHPVDFVIVEAGLGIKNDSTNVFTPVLSILTSIGLDHTDILGGTYLDIARDKGAIIKP---NVPVIYAVKNEDALKYVRERAIEQHAKPIELDREIVVV----SQ-----NDEFTYRYKDYELETIILSMLGEHQKQNAALAITALIELNEQGLIELDFNKMIDGIE-SVRWTGRIEQVH------DKPLIILDGAHNSESIDALIDTIKQYHDKEKVDILFSAINGKP----INEMVKHLSLIAHTFYATEFDFPKAL------RKEEIVGSIEND---EIQLVDDYVEFIKN----Y-QGDTLVITGSLYFISEVKSKLDFEAL |
| 1P3D Chain:A ((117-471)) | -------------------------------------FRHGIAVAGTHGKTTTTAMISMIYTQAKLDPTF--------------VNGGLVKSAGK--------------------------NA---------HLG-ASRYLIAEADESDA--SFLHLQPMVSVVTNMEPDHMDTYEGDFEKMKATYVKFLHNLPFYGLAVMCADDPVLMELVP----KVGRQVITYGFSEQADYRIEDYEQTGFQGHYTVICPNNERINVLLNVPGKHNALNATAALAVAKEE------GIANEAILEALADFQGAGRRFDQLGEFIRPNGKVRLVDDYGHHPTEVGVTIKAAREGWGDKRIVMIFQPHRYSRTRDLFDDFVQVLSQ-VDALIMLDVY-AAGEAPIVGADSKSLCRSIRNLGKVDPILVSDTSQLGDVLDQIIQDGDLILAQGAGSVSKISRGLAE---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1P3D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -144472 for 2735 contacts (-52.8/contact) +
2D Compatibility (PS) -33648 + (NN) -3409 + (LL) 9156
1D Compatibility (HY) -6800 + (ID) 2600
Total energy: -181773.0 ( -66.46 by residue)
QMean score : 0.406
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