Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKLYTSYGTYGFLHQIKINNPTHQLFQFSASDTSVIFEETDGETVLKSPSIYEVIKEIGEFSEHHFYCAIFIPSTEDHAYQLEKKLISVDDNFRNFGGFKSYRLLRPAKG-TTYKIYFGFADRHAYEDFKQSDAFNDHFSKDALSHYFGSSGQHSSYFERYLYPIKE
3KG0 Chain:A ((21-98))
---------------------------------------------------------------ADEVTFVNRFTVHGA-PAEFESVFARTAAFFARQPGFVRHTLLRERDKDNSYVNIAVWTDHDAFRRALAQPGFLPHATA--------------------------
General information:
TITO was launched using:
RESULT:
Template:
3KG0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32147 for 474 contacts (-67.8/contact) +
2D Compatibility (PS) -8668 + (NN) -5271 + (LL) 5368
1D Compatibility (HY) -800 + (ID) 600
Total energy: -42118.0 ( -88.86 by residue)
QMean score : 0.595
(partial model without unconserved sides chains):
PDB file :
Tito_3KG0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KG0-query.scw
PDB file :
Tito_Scwrl_3KG0.pdb
: