Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSETIFGKILTGEIPSFKVYEDDYVYAFLDISQVTKGHTLLIPKKASANIFETDEETM---KHIGAALPKVANAIKRAFNPDGLNIIQNNGEFADQSVFHIHFHL-----IPRYENDIDGFGYKWETHEDILDNDAKQQIAEQIQAQF
4EGU Chain:B ((5-115))
--DCIFCKIANGEIPSTKVYEDDRVLAFNDLNPVAPYHILVVPKKHYDSLIDIPDKEMDIVSHIHVVINKIAK--EKGFDQTGFRVINNCGSDGGQEVKHLHYHILAGKKLPNYE---------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4EGU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57375 for 671 contacts (-85.5/contact) +
2D Compatibility (PS) -10563 + (NN) -2359 + (LL) 2716
1D Compatibility (HY) -9600 + (ID) 2150
Total energy: -79331.0 ( -118.23 by residue)
QMean score : 0.518
(partial model without unconserved sides chains):
PDB file :
Tito_4EGU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4EGU-query.scw
PDB file :
Tito_Scwrl_4EGU.pdb
: