Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSNANNADN-KQFFSKILNSIGAGVVIALVPNALLG-EVLKIFKSGNEILELTYQLVILIQLFMAFIIGVLAAHQFKFNGAGAAIVGTSAMIGSGAVVYSNNSFMLKGIGDIIN-TSLVVIIACLIYMVLQNKLGSFELIILPVLVPIVSGGIGLITLPY-IRKITQAIGNVIHSFTD-LNPLLMSILISVAFSLLMVTPISLVAIATAISLNGLGSGAANLGIVAACVTFLFGSLRVNSIG----VNAVLLIGAAKMMIPVYLK----NLIISIPLTINGIITGIIAYV--------------LQVKGTP-----------LSAGFGYTGLVGPINA-FNRMSGDPTMNIILLAL------GYF---VIPFVSAFIVHELCKKFIPIYS------------NDIYKFE-VPKQ------------------------------------------------------------------------------------------------------------ |
4C0E Chain:A ((9-528)) | LEAAHLLEQMEYVFDEWIHLCNNPH-----ATERAAMIFVHQLHSVQLVTN-RDEFLLFLRHALDKSVERFEQGIHSGASIAESFQAVEALVKLIIIFVKSHSAAVA------FMDSILALGVLVANSHHVKRGENFNQRVFYRFFALLLHEVGLLAGHFSKSHYEQIILNFAARLFDMRPNLL--PGFACAWAGLVSHRAFLPVILGLPDEKGWAPFTKLLEQFLGCVGELVKTFTVSSLGKEMYHAALKILIVLQHDFPIYLDKFRVQLCQSLPLHATQLVNLILAAIPPNCNSLADPFQAGLKVDKIPDMKERPPTAFDSAGLLREAGLLDILERMLQNGPSEDGVAQINHAINKSTSFGYVPLGVNRRLIDAVVARFAEFAINRASSRSDSAIFVAGANDIKTLQMLVTEVSPEARYYLVSSMVNELRYPNAYTNYFSQALLDIFGHDMSDPEENLVREQIVRVLLERVLGYWPQPWGLIITILELLKNDKYLFFELPFIKATPEVAERFTALARSAA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4C0E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -304432 for 2327 contacts (-130.8/contact) +
2D Compatibility (PS) -34033 + (NN) -4148 + (LL) 1456
1D Compatibility (HY) -15600 + (ID) 2650
Total energy: -359407.0 ( -154.45 by residue)
QMean score : 0.309
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