Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVDVAFVCLGNICRSPMAEAIMRQRLKDRNIHDI--KVHSRGTGSWNLGEPPHEGTQKILNKHNIPFDGMISEL-FEATDDFDYIVAMDQSNVDNIKSINPNLKGQLFKLLEFSNMEESD------VPDPYYTNNFEGVYDMVLSSCDNLIDYIVKDANLKEG
1D1P Chain:B ((7-135))
-ISVAFICLGNFCRSPMAEAIFKHEVEKANLENRFNKIDSFGTSNYHVGESPDHRTVSICKQHGVKINHKGKQIKTKHFDEYDYIIGMDESNINNLKKIQP--EGSKAKVCLFGDWNTNDGTVQTIIEDPWY-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1D1P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44524 for 889 contacts (-50.1/contact) +
2D Compatibility (PS) -13041 + (NN) -7233 + (LL) 1904
1D Compatibility (HY) -12000 + (ID) 2300
Total energy: -77194.0 ( -86.83 by residue)
QMean score : 0.482
(partial model without unconserved sides chains):
PDB file :
Tito_1D1P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1D1P-query.scw
PDB file :
Tito_Scwrl_1D1P.pdb
: