Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------METGKSDVLDKIEKINKKDSALQEIIPKGYEIEHHQCGVALYQLIPSKKEGEPDKKVFITNTIPQITERFEDIESNEVSFNMLFYDNKTPVNIAVSAEEISDSRQLLKLVNKKLDVTSSTSTKLVDYINVSKRYNPPLNVKVATRLGHVKGYFIYPYQEVMKDSNVKLFSNDKGFQKLIDSFRSKGTLQGYSKKVFAQIKDLPMVMVMLYASLGSVLLREFGLQPFIVEISGSTSTGKTFTLNLVSSVWGTSDLITTWSSTQNSIESMASFLNSFPMFKDDTRNTHPKFVTSTTYNFSSGESKSRSNINLTLNAKKEWRNILISTGESSIANMADEKAGVSARVVTLQDP-----PYPDNFDFTTLDKSFRENYGTLG-LAFIKQYESKKDVYKN------AFESYQRYFNQKGSNEIMQRLGRAFALLQVTGEVLNDIDGFEHDHFKIIEQAYDSMVKNNKTIDKPKQLLEELLQYLDANRNNIVGDGYDSVNYGDVKAVYKHDFLCIKN---ETVKNKLGHEMQTITGQWDKKGYLIKDKKRIQKQVKHKSQRHLGYAIKKEIIEELGFDFSISHNPYTESY |
| 4GA6 Chain:A ((1-493)) | MKAKIRILDMFSGRYTVLINEEDAKEAKLHPDDLVKIEAGKKAVYGSVALSNLVGKG-------EVGISRDVLDLHN----------------FSEGETVSVIPAG-----TPESVRYIKKKMHGEKLRKVEIEAIVRDIVD-------------RKLRDIEISSFVTALEINGL----DMDEIAALTIAMAETGDMLDIDRKP-----------IMDVHSIGGVPGNKTNILVVPIVAAAGLTIPKTSS-RAITSAAGTADVVEVFADVSFSLDEIKRIVEKV----------GACLVWGGALNLA----------PADDITIKAERALSIDPTGLMLASIMSKKYAMGSQYVLIDIPTGKGVKVETVEEARSLARDFIELGKRLGQYVEVAITYGGQPIGHTVGPALEAREALSALMTGKGPGSLIEKATGLAGILLEMGGVAPA---------GTGKKMAKEILESGKAWEKMKEIIEA--QGGDPNIK------PEEIPIGDKTYTFT----AATSGYVTAIDNRAITAIARAAGAPEDKGAGIELYVKVGEKVKEGDPLFTIHAEHEARLDQAIVLARRTEPIRIE-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GA6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3092 for 4159 contacts (-0.7/contact) +
2D Compatibility (PS) -49386 + (NN) -5773 + (LL) 5320
1D Compatibility (HY) -10800 + (ID) 3400
Total energy: -67131.0 ( -16.14 by residue)
QMean score : 0.250
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