Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTRLWASLLTVIIYILSQFLPLLIVKKLPFVQYSGIELTKAV----IYIQLVLFLIAATTIILINLKIKNPTKLELEVKEPKKYIIPWALLGFALVMIYQMVVSIVLTQIYGGQ--------QVSPNTEKLIIIARKIPIFIFFVSIIGPLLEEYVFRKVIFGELFNAIKGNRIVAFIIATTVSSLIFALAHNDFKFIPVYFGMGVIFSLAYVWTKRLAVPIIIHMLQNGFVVIFQLLNPEALKKATEQANFIYHIFIP
2ONK Chain:C ((24-275))
MRLLFSALLALLSSIILLFVLLPVAATVTLQLFNFDEFLKAASDPAVWKVVLTTYYAALISTLIAVIFGTPLAYILARKSFPGKSVVEGIVDLPVV-IPHTVAGIALLVVFGSSGLIGSFSPLKFVDALPGIVVAMLFVSVPIYINQAKEGFASVDVRLEHVARTLGSSPLRVFFTVSLPLSVRHIVAGAIMSWARGISEF------GAVVVIAYYPMIAPTLIYERYLSEGLSAAMPVAAILILLSLAVFVALRIIVG
General information:
TITO was launched using:
RESULT:
Template:
2ONK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -180080 for 1764 contacts (-102.1/contact) +
2D Compatibility (PS) -24736 + (NN) -3483 + (LL) 600
1D Compatibility (HY) -10800 + (ID) 1600
Total energy: -220099.0 ( -124.77 by residue)
QMean score : 0.139
(partial model without unconserved sides chains):
PDB file :
Tito_2ONK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ONK-query.scw
PDB file :
Tito_Scwrl_2ONK.pdb
: