Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDPVGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIMFFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI
3F6C Chain:A ((3-116))
-NAIIIDDHPLAIAAIRNLLI-----KN-DIEILAELTEGGSAVQRVET-LKPDIVIIDVDIPG-VNGIQVLETLRKRQYSGIIIIVSAK---FYGKHCADAGANGFVSKKEGMN---NIIAAIEA----------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3F6C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -97789 for 874 contacts (-111.9/contact) +
2D Compatibility (PS) -12077 + (NN) -7468 + (LL) 9776
1D Compatibility (HY) -6400 + (ID) 1100
Total energy: -115058.0 ( -131.65 by residue)
QMean score : 0.540
(partial model without unconserved sides chains):
PDB file :
Tito_3F6C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F6C-query.scw
PDB file :
Tito_Scwrl_3F6C.pdb
: