Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRPEKIQNVVKLLSSLGVNIKKTKSRLDIINTLPASNKVSHELK------------
2YF2 Chain:A ((7-63))
ADVCGEVAYIQSVVSDCHVPTEDVKTLLEIRKLFLEIQKLKVELQGLSKEFLEHILH
General information:
TITO was launched using:
RESULT:
Template:
2YF2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1327 for 179 contacts (7.4/contact) +
2D Compatibility (PS) -4601 + (NN) 346 + (LL) 0
1D Compatibility (HY) -2800 + (ID) 400
Total energy: -6128.0 ( -34.23 by residue)
QMean score : 0.652
(partial model without unconserved sides chains):
PDB file :
Tito_2YF2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2YF2-query.scw
PDB file :
Tito_Scwrl_2YF2.pdb
: