Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKGTPHIQPNGVKIAKTVLMPGDPLRAKYIADNFLENVEQFNDVRNMFGYTGTYKGKEVSVMGSGMGIPSIGIYSYELYNFFDVDTIIRIGSCGALQENVNLYDVIIAQAASTNSNYVDQYNIPGH-FAPIADFELVTKAKNVADQIGATTHVGNVLSSDTFYNADPTFNDAWKKMGILGIEMESAGLYLNAIHAGKKALGIFTVSDHILRDEATTPEERQNSFTQMMEIALEIAE
3OF3 Chain:J ((3-231))
----TPHINAQMGDFADVVLMPGDPLRAKYIAENFLDNAVQVCDVRNMFGYTGTYKGRKISVMGHGMGIPSCSIYVTELIKDYGVKKIIRVGSCGAVNEGIKVRDVVIGMGACTDSK-VNRIRFKDHDFAAIADYKMVKAAEEAAKARGIDVKVGNLFSAELFYTPDPSMFDVMDKYGIVGVEMEAAGIYGVAAEYGAKALAICTVSDHIKTGEQTTSEERQNTFNEMIEIALD---
General information:
TITO was launched using:
RESULT:
Template:
3OF3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -146371 for 2036 contacts (-71.9/contact) +
2D Compatibility (PS) -24120 + (NN) -7471 + (LL) 696
1D Compatibility (HY) -24000 + (ID) 6200
Total energy: -207466.0 ( -101.90 by residue)
QMean score : 0.571
(partial model without unconserved sides chains):
PDB file :
Tito_3OF3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OF3-query.scw
PDB file :
Tito_Scwrl_3OF3.pdb
: