Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNILVIGANGGVGSLLVQQLAKENV-PFTAGVRQSDQLNALKSQGMKAILVDVENDSIETLTETFKPFDKVIFSVGSGGNTGADKTIIVDLDGAVKSMIASKEANIKHYVMVSTYDSRRQAFDDSGDLKPYTIAKHYADDYLRRSGLNYTILHPGALTNAAGS--GK------IEAAQYFDGKGEIPREDVATVLKEIVTSNHFNHQEFQIISGEQDIKDALTQFEIEKD
3E48 Chain:A ((1-214))
MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFN-QES-MVEAFKGMDTVVFIPSIIHPS------FKRIPEVENLVYAAKQSGVAHIIFIGYYADQHNNP---FHMSPY---FGYASRLLSTSGIDYTYVRMAMYMDPLKPYLPELMNMHKLIYPAGDGRINYITRNDIARGVIAIIKNPDTWGKRYLLSGYSYDMKELAAILSEA--
General information:
TITO was launched using:
RESULT:
Template:
3E48.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81890 for 1592 contacts (-51.4/contact) +
2D Compatibility (PS) -21983 + (NN) -6810 + (LL) 400
1D Compatibility (HY) -12000 + (ID) 2000
Total energy: -124283.0 ( -78.07 by residue)
QMean score : 0.477
(partial model without unconserved sides chains):
PDB file :
Tito_3E48.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3E48-query.scw
PDB file :
Tito_Scwrl_3E48.pdb
: