Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------MLESKWGLRFIAFLLALFFFLSVNNVFGNIFNTGNLGQKSSKTIQDVPVEILYN--------TKDLH-LTKAPE----TVNVTISGPQSKI--------------------------IKIENPEDLRVVIDLSNAKAG-------KYQEKYQVKGLADDIHYSVKPKLA-NITLENKVTKKMTVQPDVSQSD---------IDPLYKITK---------QEVSPQTVKVTGGEEQLNDIAYLKAT--------------------FKTNKKINGDTKDVAEVTAFDKKLNKLNVSIQPNEVNLQVKVEPFSKKVKVNVKQ------KGSLADDKE---LSSIDLEDKEIEIFGSRDDLQN-----ISEVDAEV-DLDGISESTEKTVKINLPEHV----------TKAQPSETKAYINVK------- |
| 4OJD Chain:H ((14-490)) | RAEPPHCSKTPIVRAQTSQNAMGMQMQFSIGLHTAVCFRLYSLLHTI--RLEKLEHHHPITQRYTFGIPEVHASCICECDATSSTCTAESHQFTACPEDETSSCYRTFFPNQTPIGCSEDDIPKLCCDVRFKPYKNMTFLAVKLEQPTTYATFVYAAYDFVNGYWVEKDKTKIRSQLDGGTQDRHLDQKRRISLAVTAGARASHQLETGMYFSRTSNGGETEELRMQPLNEITDNNFDRLGWYRMDDSGHFHVNNGVVKMEEIHKAKVKNCKEQTYKSILSANHYMPGHFNLTRPLEVIKPWIQSARIFDSSLRQAVVTHAEGT-NLQISIHLESQNLVFFHNASRIRDFSGSIIVDSKSNRLFNLTVYEASGKIDGSVKMSTGFGSDTIHTFTAYVSDL----HASNRSMIIPLPAIVGQGARAICLRADSMADIDKICHVIEYFESPLF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OJD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 530 for 1873 contacts (0.3/contact) +
2D Compatibility (PS) -31472 + (NN) 10734 + (LL) -40
1D Compatibility (HY) -12400 + (ID) 2900
Total energy: -35548.0 ( -18.98 by residue)
QMean score : 0.238
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