Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDFSNFFQNLSTLKIVTSILDLLIVWYVLYLLITVF------KGTKAIQLLKGILVIVIGQQISMIL--NLTATSKLFDIVIQWGVLALIVIFQPEIRRALEQLGRGSFLKRYTSNTYSKDEEKLIQSVSKAVQYMAKRRIGALIVFEKETGLQDYIETGIAMDSNISQELLINVFIPNTPLHDGAMIIQGTKIAAAASYLPLSDSPKISKSLGTRHRAAVGISEVSDAFTVIVSEETGDISVTFDGKLRRDISNEIFEELLAEHWFGTRFQKKGVK--- |
1B74 Chain:A ((1-252)) | MKIGIFDSGVGGLTVLKAIRNRYRKVDIVYLGDTARVPYGIRSKDTIIRYSLECAGFLKDKGVDIIVVACNTASAYALERLKKEINVPVFGVIEPGVKEALKKSRNKKIGVIGTPATVKSG------AYQRKLE-----EGGADVFAKACPLFAPLAEEGLLEGEITRKVVEHYLKEFKGKID---TLILG------CTHYPLL-KKEIKKFLGDAEVVDSSEALSLSLHNFIKDDGSSSLELFFTDLSPN-------LQFLIKLILGRDYPVKLAEGVF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1B74.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -183071 for 2002 contacts (-91.4/contact) +
2D Compatibility (PS) -24664 + (NN) 1237 + (LL) 2412
1D Compatibility (HY) -6800 + (ID) 1650
Total energy: -212536.0 ( -106.16 by residue)
QMean score : 0.251
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