Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKKVYFNHDGGVDDLVSLFLLLQM-ENVQLIGVSTIGADCYLEPSLSASVKIINRFSNEDIQVAPSYERGK------NPFPKEWRMHAFFMDALPILN--------EPVKHVASNVSDKEAFEDIIQTLKRQSEKVTLLFTGPLTDLAKALQK-DSSIVQYIEKLVWMGGTFLPKGNVEEPEHDGSAEWNAYWDPEAVKIVFDS-DIEIDMVALESTNQVPL-TLDVRQRWANERQYTGIDFLGVSYAAVPPLTHFITNSTYFLWDVLTTAYIGNKDLVHSIEKKVDV-ISYGPSQGKTFECKDGRKINVINHVDNNAFFDYITALAKKVN |
| 4I75 Chain:B ((4-302)) | MAKTVILDHDGNKDDFVAMILLLSNPKKVNLIGCICTDADCFVENGFDVTGKIMCAMHR--LIKTPLFPIGKSTATAVNAFPTEWRFSAKNLDDMPFLNIVEDVALWEKLKPENEAHNGQQLLADLVM---KSKEKVTVCVTGPLSNMAWCIEKYGEAFTSKVEECVIMGGAVDVGGNVFLPTTDGSAEWNIYWDPPAAKKVLCCPNIRCVLFSLDATNTVPVRSVDVKG-FGAQNQYLLSQMVGTMWAMSTHEEILRDGDAYYAWDALTAAYILEPTIATLEPVALDVDVSKGKSEGRT-------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4I75.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -141038 for 2421 contacts (-58.3/contact) +
2D Compatibility (PS) -28782 + (NN) -6341 + (LL) 2516
1D Compatibility (HY) -22400 + (ID) 4950
Total energy: -200995.0 ( -83.02 by residue)
QMean score : 0.417
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