Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKLLLPLIIMLLVLAACGNQGEKNNKAETKSYKMDDGKTVDIPKDPKRIAVVAPTYAGGLKKLGANIVAVNQQV--DQSKVLKD-----KFKGVTKIGDGDVEKVAKEKPDLIIVYST-----DKDIKKYQKVAPTVVVDYNKHKYLEQQEMLGKIVGKEDKVKAWKKDWEETTAKDGKEIKKAIGQDATVSLFDEFD-KKLY-TYGDNWGRGGEVLYQAFGLKMQPEQQKLT----AKAGWAEVKQEEIEKYAGDYIVSTSEGK-PTPGYESTNMWKNLKATKEGHIVKVDAGTYWYNDPYTLDFMRKDLKEKLIKAAK |
| 3R5T Chain:A ((3-290)) | --------------------------NVWPRTFQNADGSITTIPSQPKRILSTAVTVTGTLLAIDAPVIASAATTQSTFFEQWRKLAELRQVKKLWPAGSVDLESVYVEQPDLIVVSMIGADSARDQIPLLQAIAPTILVDYSDQTWQSLAQQLGLATGLEEQAERTIHNFEQWTKQVRDVLDL---PKGRANIVSYHGPGVVNAVAKAQS--AHAQLLQSVGVVLEEPDPAWQAGSIVHRDFLRIHYEHLTQLQAETTFLITMTDQQAQAFLHDPILKNLPSIQRKQVYGLGENSF-RIDLFSAREIINSLLRRFAGEQ- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3R5T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -24674 for 2223 contacts (-11.1/contact) +
2D Compatibility (PS) -28957 + (NN) -9333 + (LL) 2608
1D Compatibility (HY) -10800 + (ID) 2400
Total energy: -73556.0 ( -33.09 by residue)
QMean score : 0.424
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