Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKLVTATTLTAGIGTALVGQAHHADAAENYTNYNNYNYNTTQTTTTTTTTTTTSSISHSGNLYTAGQCTWYVYD-----KVGGEIGSTWGNANNWAAAAQGAGFTVNHTPSKGAILQSSEGPFGHVAYVESVNSDGSVTISEMNYSGGPFSVSSRTISASEAGNYNYIHI |
2K3D Chain:A ((12-98)) | ---------------------AFFNEQKEKVTLYLKHNIPDFNTVTFTNEEFNPIGISIDGYINNDKNLSFTAGKDVKIFSSSEELDKMFQEPRKGYDEILEHHHHHH--------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2K3D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6769 for 488 contacts (-13.9/contact) +
2D Compatibility (PS) -8877 + (NN) -2532 + (LL) 3924
1D Compatibility (HY) 0 + (ID) 600
Total energy: -14854.0 ( -30.44 by residue)
QMean score : 0.108
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