Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAYTYTLKDIIEITGVTKRTLHYYDEIGLLVPD-KNDKNYRVYKQQDLEKLQKILILKSFDFDIAKIKQYISYDN------EQLRKLLSEQISKLDKKISDLQLIRRSVCEFIKGLSLIDTSILNKTLQSQYDKEASIKYGHTKAYQSFIRRKDSLQSQDIRHKLTTIFNKFNHMSLSHYPIQDCSDLVFEWKAFMNTIADFDDETLCCIAKTYEDDTRFKDYFNSYDNQNLASYISEAVNYFLSNVNKSDNF |
| 3GP4 Chain:A ((2-112)) | ---SLNIKEASEKSGVSADTIRYYERIGLIPPIHRNESGVRKFGAEDLRWILFTRQMRRAGLSIEALIDYLALFREGEHTLEARAELLKKQRIELKNRIDVMQEALDRLDFKID------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GP4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -29269 for 640 contacts (-45.7/contact) +
2D Compatibility (PS) -11347 + (NN) -3344 + (LL) 9152
1D Compatibility (HY) -4800 + (ID) 1250
Total energy: -40858.0 ( -63.84 by residue)
QMean score : 0.685
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