Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNIRHIRNA-----------TAVIEY---GGKRILIDPMLSDKGSFDPFPNSPRQDQKNPLVELPMAIEDIINDIDLVILTHLHIDHFDPKAIEVL-------PKDIKIYAQNEEDASEVERYGF---------TNVSVFND--VTHIGEIELIKTDAQHGHGEILKMTGHVHGMILKH-----------SEEPTLYLAADTVWFEGVEKALKTYQPDVVVLNGGANQFFE---GGPLVMDEHDVLKVANTLPLAQIVVVHMEAVNHWHLSRKELNEFINSNDLGNRVVVPNDGELLTFEK
1Y44 Chain:A ((1-305))MELLFLGTGAGIPAKARNVTSVALKLLEERRSVWLFDCGEATQHQ---------------MLHTTIK---P-RKIEKIFITHMHGDHVYGLPGLLGSRSFQGGEDELTVYGPKG-IKAFIETSLAVTKTHLTYPLAIQEIEEGIVFEDDQFIVTAVSVIHGVEA--------FGYRVQEKDVPGSLLEPPKKGRSVVFSGDTRVSDKLKELAR--DCDVMVHEATFAKEDRKLAYDYYHSTTEQAAVTAKEARAKQLILTHISARYQGD-ASLELQKEAVDVFP--NSVAAYDFLEVNVP-


General information:
TITO was launched using:
RESULT:

Template: 1Y44.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -112895 for 1929 contacts (-58.5/contact) +
2D Compatibility (PS) -23630 + (NN) -2929 + (LL) 1208
1D Compatibility (HY) -3600 + (ID) 1400
Total energy: -143246.0 ( -74.26 by residue)
QMean score : 0.434

(partial model without unconserved sides chains):
PDB file : Tito_1Y44.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1Y44-query.scw
PDB file : Tito_Scwrl_1Y44.pdb: