Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNIRHIRNA-----------TAVIEY---GGKRILIDPMLSDKGSFDPFPNSPRQDQKNPLVELPMAIEDIINDIDLVILTHLHIDHFDPKAIEVL-------PKDIKIYAQNEEDASEVERYGF---------TNVSVFND--VTHIGEIELIKTDAQHGHGEILKMTGHVHGMILKH-----------SEEPTLYLAADTVWFEGVEKALKTYQPDVVVLNGGANQFFE---GGPLVMDEHDVLKVANTLPLAQIVVVHMEAVNHWHLSRKELNEFINSNDLGNRVVVPNDGELLTFEK |
1Y44 Chain:A ((1-305)) | MELLFLGTGAGIPAKARNVTSVALKLLEERRSVWLFDCGEATQHQ---------------MLHTTIK---P-RKIEKIFITHMHGDHVYGLPGLLGSRSFQGGEDELTVYGPKG-IKAFIETSLAVTKTHLTYPLAIQEIEEGIVFEDDQFIVTAVSVIHGVEA--------FGYRVQEKDVPGSLLEPPKKGRSVVFSGDTRVSDKLKELAR--DCDVMVHEATFAKEDRKLAYDYYHSTTEQAAVTAKEARAKQLILTHISARYQGD-ASLELQKEAVDVFP--NSVAAYDFLEVNVP- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Y44.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -112895 for 1929 contacts (-58.5/contact) +
2D Compatibility (PS) -23630 + (NN) -2929 + (LL) 1208
1D Compatibility (HY) -3600 + (ID) 1400
Total energy: -143246.0 ( -74.26 by residue)
QMean score : 0.434
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