Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ----------------------------------------------------------------------------------------------------MSFYEFMQSFL-GD-DTPLGELVDWINQDSNFPREV-------KSHSEILSYFRTNPCPESISVPVIKRALSVFNQFTNVQ------------------------------------------------------------------------------ |
4RGP Chain:A ((2-256)) | NATEQETLTILLDVYAYYQAYQIVKASQFFSDDIIFLLELLKERRELNVDFLFQNQVHLQELELTYHISLLDNAYEEELLANYIMDLEAKLRNDHIIDFVRSVSPILYRLLMRLMQSQVADINDYIYDAKNDQYDTWKFDKMHDSANPFVQNFVAKGRDSKIT----SRSLADFIQLTDLPQAIKDNILLLRDFEKSVRNPLAHLIKPFDEEELHRTTGFSSQTFLEKIIQLAVFSGIHYDNDKFYFDKVNELIKRIYQ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4RGP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -11114 for 370 contacts (-30.0/contact) +
2D Compatibility (PS) -7062 + (NN) -4035 + (LL) 448
1D Compatibility (HY) -3600 + (ID) 650
Total energy: -26013.0 ( -70.31 by residue)
QMean score : 0.367
|
|
|