Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTKIKIMSVRDEDMPYIKAWAEKHHVEVDITKEALTDDNVEGVAGYDGLSLSQQIPLSE-HVYKRLNELGIKQIAQRSAGFDTYDLELANKYNLIVSNVPSYSPNSIAEFAVNQAINVVRHFNQIQTKVREHDFRWEPTILSKSIKDLKVAVIGTGRIGRVVADIFANGYQSDVVAYDPFPNAKIATYVDYKDTIEEAVEGADIVTLHVPATKYNHYLFNAELFKHFKKGAVFVNCARGSLVDTKALLDALDNGVIKGAALDTYEFERKLFPSDQRGKTPNDPLLESLIDREDVILTPHIAFYTEAAVKNLIVDALDATLDVLQTGDTRLRVN |
4XKJ Chain:B ((2-329)) | --KIIMFSVRDDEEAAIREWEKKTGVQVDINRLELDAETAQLTKGYDGIVIQQRSHISNPAVYETLQKNGLRQLTSRTAGYDMIDLEQASERGLVVTNVPAYSPNSVAELALTQTMRLIRNLPLFDARGAEQDFRW-AGLMAREIRSLTVGIIGAGRIGGTVARLF-KALGATVIANDIVERVELKDIVTYVSK-EELLQAADVVTLHVPLMDSTTQLIDADALALMKNDAVLINASRGPVVDTDALIAALQNKQIAGAALDTLNGEEHFFNQDLCGKELPSEQLKVLRTLPNVLITPHIGFYTNKAVQNMVEISLNDVLAILKTGTSEHQLN |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4XKJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -200556 for 2683 contacts (-74.8/contact) +
2D Compatibility (PS) -35547 + (NN) -18522 + (LL) 712
1D Compatibility (HY) -29200 + (ID) 6350
Total energy: -289463.0 ( -107.89 by residue)
QMean score : 0.548
|
|
|