Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------MTSIKT---ITPKDF-------IFRVLSGVAIGIVAGLVPNAILGEIFKYFMD------YHPIFKTLLGVVVAIQ-------------FTVPALIGALVAMKFDLSPL-AIAVVASAAYVGSGAAQFKNGAWMIT----GIGDLINTMITAAIAVLFILLIQHRVGSMALIVF------PTVV-----GGISGAIGVLILPYTKMITTAIGNMVNGFTELQPIVMSILISMVF-------SLIIISPLSTVA-IAFAIGITGLAAGSASIGISATEAVLIIGTSKVNRLGVPLSV--FFGGVKMMIPNMVKYPI-LMLPILTTAIVSGLVSALVGIHGTKESAGFGFIGMVGPINAFKFMEVDSAWLSVLLIVVAFFVVPFVTAWLADIIYRKVFRLYTNDIFKFMG |
| 4CP6 Chain:A ((13-417)) | TKVGSIIQQNNIKYKVLTVEGNIGTVQVGNGVTPVEFEAGQDGKPFTIPTKITVGDKVFTVTEVA-SQAFSYYPDETGRIVYYPSSITIPSSIKKIQKKGFHGSKAKTIIFDKGSQLEKIEDRAFDFSELEEIELPASLEYIGTSAFSFSQKLKKLTFSSSSKLELISHEAFANLSNLEKLTLPKSVKTLGSNLFRLTTSLKHVDVEEGNESFASVDGVLFSKDKTQLIYYPSQK-NDESYKTPKETKELASYSFNKNSYLKKLELNEGLEKIGTFAFA-DAIKLEEISLPNSLETIERLAFYGNLELKELILPDNVKNFGKHVMNGLPKLKSLTIGNNINSLPSFFLSGVLDSLKEIHIKNKSTEFSV-----KKDTFAIPET-----------VKFYVT---SEHIKDVLKSNLST--SNDIIVEKV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CP6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -358830 for 2431 contacts (-147.6/contact) +
2D Compatibility (PS) -32587 + (NN) 19897 + (LL) 2568
1D Compatibility (HY) -9200 + (ID) 3800
Total energy: -381952.0 ( -157.12 by residue)
QMean score : 0.151
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