Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLNKEQRRITAEELQAHFEESTLSVQMIAEKLNVTTEDVEKVLAMTAPLGIFSHQLQRFIHLVWDVRDVINDNIKGNGQTPEPYTYLKGEKEDYWFLR
2BNM Chain:A ((5-47))
----KTASTGFAELLKDRREQVKMDHAALASLLGETPETVAAWENGE----------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2BNM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11446 for 246 contacts (-46.5/contact) +
2D Compatibility (PS) -4824 + (NN) -2337 + (LL) 3352
1D Compatibility (HY) 400 + (ID) 500
Total energy: -15355.0 ( -62.42 by residue)
QMean score : 0.790
(partial model without unconserved sides chains):
PDB file :
Tito_2BNM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BNM-query.scw
PDB file :
Tito_Scwrl_2BNM.pdb
: