Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNILFGISDTQECYNAIKFAVKLAHSLKEVRFTLLHVSMEVFIYSESGMMDYGQTEALEEEKAKALLKQFEDAFKK-ENIECESVLKSGDLIDVVLDMAK---DYDLLLIGASESNLLYR-LFISHQNSLVEQSSIPVVIAK
3S3T Chain:A ((6-146))
TNILVPVDSSDAAQAAFTEAVNIAQRH-QANLTALYVVDDSAYHTPALDPVLSELLDAEAAHAKDAMRQRQQFVATTSAPNLKTEISYGIPKHTIEDYAKQHPEIDLIVLGATGTNSPHRVAVGSTTSYVVDHAPCNVIVIR
General information:
TITO was launched using:
RESULT:
Template:
3S3T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -108672 for 1021 contacts (-106.4/contact) +
2D Compatibility (PS) -15019 + (NN) -6650 + (LL) 64
1D Compatibility (HY) -1200 + (ID) 1350
Total energy: -132827.0 ( -130.10 by residue)
QMean score : 0.497
(partial model without unconserved sides chains):
PDB file :
Tito_3S3T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3S3T-query.scw
PDB file :
Tito_Scwrl_3S3T.pdb
: