Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRMLAEFEKIQAILMAFPHEF-G---------D-WA--YCIEEARESFLHIIQTIA-KHAKVLVCVHTNDTIG------------------------YE-------------TL--KN-----------------------LPGVEIARIDTNDTWARDFGAISVENHGVLECLDFGFNGWGLKYPSNLDNQVNFKLKHLG--F--LKHPL-------KTMPYILEGGSIESDGAGSILTNTQCLLEKNRNPHLNQNGIETMLKKELG----AKQVLWYSYGYLKGDDTDSHTDTLARFLNKDTIVYSACEDEND-E---------HYTA-----LKKMQEELKTFKKLDG-TPYKLIPLEIPKAVYNENQQRLPATYVNFLLCN-NALIVPTYNDPNDTLILETLRQHTPLEVIGVDCNTLIKQHGSLHCVTMQLY |
| 2A9G Chain:A ((8-412)) | -LGVHSEAGKLRKVMVCSPGLAHQRLTPSNCDELLFDDVIWVNQAKRDHFDFVTKMRERGIDVLEMHNLLTETIQNPEALKWILDRKITADSVGLGLTSELRSWLESLEPRKLAEYLIGGVAADDLPASEGANILKMYREYLGHSSFLLPPLPNTQFTRDTTCWIYGG---VTLNPMYWPA------RRQETLLTTAIYKFHPEFANAEFEIWYGDPDKDHGSSTLEGGDVMPIGNGVVLIGMG---------ERSSRQAIGQVAQSLFAKGAAERVIVAGL---PKSRAAMHLDTVFSFCDRDLVTVFPEVVKEIVPFSLRPDPSSPYGMNIRREEKTFLEVVAES---LGLKKLRVVETG----------REQWDDGNNVVCLEPGVVVGYDRNTY----TNTLLRK-AGVEVITISASELGRGRGGGHAMTCPIV |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2A9G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -107208 for 2451 contacts (-43.7/contact) +
2D Compatibility (PS) -30641 + (NN) -4107 + (LL) 1960
1D Compatibility (HY) -10000 + (ID) 2050
Total energy: -152046.0 ( -62.03 by residue)
QMean score : 0.304
|
|
|