Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLVSRFLNAIDPFNLGVLLSRFQIKNGCIYGVCSYKVSKFTPGYEESKARVLNALNILSKHQIWQSNQESVTKVKGTFVFILENDLHLDENSFYKKLLNLIIDNDFFNRSHLVTPSNGTNSHPELHRSITPREAARIQSFSDDYIFYGNKTSVCKQIGNAVPPLLALALGKAILKSARNDTNPSR
4FT2 Chain:B ((679-734))
------------------------------------------------------------------------------------------------------------------PHNQVIIHPTQARVLTIRENARLQGFPDYYRLFGPIKEKYIQVGNAVAVPVARALGYCLGQAYLGESEGSD
General information:
TITO was launched using:
RESULT:
Template:
4FT2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10987 for 290 contacts (-37.9/contact) +
2D Compatibility (PS) -6167 + (NN) -4296 + (LL) 8100
1D Compatibility (HY) -2400 + (ID) 1200
Total energy: -16950.0 ( -58.45 by residue)
QMean score : 0.211
(partial model without unconserved sides chains):
PDB file :
Tito_4FT2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4FT2-query.scw
PDB file :
Tito_Scwrl_4FT2.pdb
: