Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQNLLIQAENAIALLFLLNDKNLKGKIDLIYIDPPFATNNHFTITNGRATTISNSKNGDIAYSDKVVGMDFMEFLKQRLVLLKELLSEQGSIYVHTDYKIGHYVKVMLDEIFGIQNFRNEITRIKCNPKNFKRIGYGNIKDMILFYSKGKNPIFNEPKIPYTPQDLEKRFPKIDKDKRRYTTVPIHAPGEVESGECSKAFKGMLPPKGRHWRTDIATLERWDKEGLIEYSNNNNPRKKIYALEQVGKRVQDIWEFKDPQYPSYPTEKNAQLLDLIIKTSS-NKDSIVLDCFCGSGTTLKSAFLLQRKFIGIDNSDLAIQACKNKLETITKDLFVSQNFYDFLVF
1QAM Chain:A ((17-88))-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQFKFP


General information:
TITO was launched using:
RESULT:

Template: 1QAM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19778 for 469 contacts (-42.2/contact) +
2D Compatibility (PS) -7833 + (NN) -5071 + (LL) 15772
1D Compatibility (HY) -1200 + (ID) 500
Total energy: -18610.0 ( -39.68 by residue)
QMean score : 0.565

(partial model without unconserved sides chains):
PDB file : Tito_1QAM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1QAM-query.scw
PDB file : Tito_Scwrl_1QAM.pdb: