Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MDKGKSVKSTKKSVGMPPKTPKTDNNANSHVDNEFLILQVNDAVFPIGSYTHSFGLETYIQQKKVTNKESALE---YLKANLSSQFLYTEMLSLKLTYESTLQQDLKK--------ILGIEEVIMLSTSPMELRL---ANQKLGNRFIKTLQAMNELDMGAFFNAYAQTTKDPTHATSYGVFAASLNMELKKALRHYLYAQTSNMVINCVKSVPLS---QNDGQKILLSLQSP-FNQLIEKTLELDESHLCAASVQNDIKAMQHES------LYSRLYMS------------------------------------------------------------------------------ |
| 3F8U Chain:B ((21-401)) | GPAVIECWFVEKRPGALLLPPPRPDLDPELYLSVHDPAGALQAAFRRYPRGAPAPHCEMSRFVPLPASAKWASGLTPAQNCPRALDGAWLMVSISSPVLSLSSLLRPQPEPQQEPVLITMATVVLTVLTHTPAPRVRLGQDALLDLSFAYMPPTSEPGPPPFGLEWRRQHLGKGHLLLAATPGLNGQMPAAQEGAVAFAAWDDDEPWGPWTGNGTFWLPRVQPFQEGTYLATIHLPYLQGQVTLELAVYKPPKVSLMPATLARAAPGEAPPELLCLVSHFYPSGGLEVEWELRGGPGGRSQKAEGQRWLSALRHHSDGSVSLSGHLQPPPVTTEQHGARYACRIHHPSLPASGRSAEVTLE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3F8U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5235 for 1910 contacts (-2.7/contact) +
2D Compatibility (PS) -25754 + (NN) 11346 + (LL) 0
1D Compatibility (HY) -3600 + (ID) 1800
Total energy: -25043.0 ( -13.11 by residue)
QMean score : -0.022
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