Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIFGTDGVRGKAGVKLTPMFVMRLGIAAGLYFKKHSQTNKILIGKDTRKSGYMVENALVSALTSIGYNVIQIGPMPTPAIAFLTEDMRCDAGIMISASHNPFEDNGIKFFNSYGYKLKEEEERAIEEIFHDEELLHSSYKVGESVG-SAKRIDDVIGRYIAHLKHSFPKHL-NLQKLRIVLDTANGAAYKVAPVVFSELGADVLVINDEPNGCNINEQCGA--LHPNQLSQEVKKYRADLGFAFDGDADRLVVVDNLGNIVHGDKLLGVLGVYQKSKNALSSQAVVATSMSNLALKEYLKSQDLELKHCAIGDKFVSECMRLNKANFGGEQSGHIIFSDYAKTGDGLVCALQVSALVLESKLVSSIALNPFELYPQSLVNLNIQKKPP---LE----SL----KGYSALLKELD--QLEIRHLIRYSGTENKLRILLEAKDEKLLESKMQELKEFFEGQLC |
| 2F7L Chain:A ((2-454)) | GKLFGTDGVRGIVNKELTPELVLKLSKAIGTFFGKN---SKILVGRDVRAGGDMLVKIVEGGLLSVGVEVYDGGMAPTPALQYAVKTLGYDGGVVITASHNPAPYNGIKVVDKDGIEIRREKENEIEDLFFTER---FNTIEWSSLTTEVKREDRVISTYVNGILSHVDIEKIKKKNYKVLIDPANSVGALSTPLVARALGCKIYTINGNLDPLFSARQPEPTFDSLKETAEVVKTLKVDLGVAHDGDADRAIFIDSEGRVQWGDRSGTLLSYWASVKNPKAIKKIVTAVSSSSLVEEYLSKYNIQVDWTKVGSVDIAHKVADENALAGFEENGGFMYPPHQYVRDGAMSFALMLELLANENVSSAELFDRLPKYYLVKTKVDLKPGLMVEEIYKKILEVYSTSSVKAITIDGVKIIGKDFWFLVRKSGTEPIIRIMAEAKDENVANNLVNELKKIVEGK-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2F7L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -201305 for 4030 contacts (-50.0/contact) +
2D Compatibility (PS) -46618 + (NN) -19552 + (LL) 836
1D Compatibility (HY) -19600 + (ID) 6150
Total energy: -292389.0 ( -72.55 by residue)
QMean score : 0.430
|
|
|