Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRYFLVVFLFLFVGCMKKDFTLKDLSLPQEASSYLASSQNSSHNNQSIDPQALRENLKESYLKAWYSPWLDAKVKSNKKEVFWILKEMNKSTGYGEDLKPNAKAFNDELIKNMDIERYPSTKIKAVVVRNNDVRAVPTNKPYYLSPKGYPFDRFQNSLVFPGTPVLITPF--NPDKTYPPLQSSFV-YGWIKVSELAYMRDKEIELLTKLKNYDMPIKEKNPLYTDY----GEFYPHAK--IGELFPLIPQIQNASQIPPKKELKAYGFLKDAKGYAALQSVFLDEKDFFVFPKAFTSEIMAYFINTMLGQKYGWGGLLGNRDCSAFTRDSFANFGILLPRNSYAQSRYANNYVDLSSMKAKEKEDYIIKNATPFGTLIYLKGHIMLYLGERNHQAIVAHSIWSVQTQKHFKTLSHKIGGVVITSLWLAEEHNGAFSKKKLLIDRVLGMSDLKDFVHKTSSPLNAN |
| 1M9S Chain:A ((474-595)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------SVYQGKNMRILREAKTPITTWYQFSIGGKVIGWVDTRALNTFYKQSMEKPTRLTRYVSANKAGESYYKVPVADNPVKRGTLAKYKNQKLIVDCQA----TIEGQLWYRIRTS-STFIGWTKAANLRAQ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1M9S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14523 for 690 contacts (-21.0/contact) +
2D Compatibility (PS) -11382 + (NN) 6563 + (LL) 21860
1D Compatibility (HY) 400 + (ID) 850
Total energy: 2068.0 ( 3.00 by residue)
QMean score : 0.097
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