Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLIHICCSVDNLYFLKKAKEAF-AGEKIVGFFYNPNIHPYSEYLLRLEDVKRTCEMLGIELL-EGDYELEKFLDKAKGKELLGEKSERCFECFDLRLEASALKAFELGEEKFTTTLLTSPKKDP-NQLIAKGQHIAQRHNLEFVVFRNDNFEHFKSELDLNLQALARENELYRQNYCG-CQFAL-KIQKESQNRSPFELYSPLKRQILPASIEERTQVFRELDAAKKDANKPFLAQ-KTIATYRLLNGGVWLSKNSNPLDCCILARSKSKAKVRINDLRWVFSQRLSALVGYSQRDETLFLTLEGLNTLMAKNY-DNLKELNLNPLSYEEELSLRALVSGSESINPIIVLEERTEKTLFVEIKSIFQEEKVFYLL |
| 4QPV Chain:A ((17-290)) | -----------------SVPEEMEASKYVGQGFQPPAE--KDAIEFSKKHKDKIAKRGEQFFMD-NFGLKVKATNVVGS---GDGVEVFVHCDDHDIVFNASIPFDKSIIESDSSLRSEDKGDDMS-------------TLVGTVLSGFEYRAHKEELDNLTEVLKEYKSKY--KYTGYTENAIMKTQNSGFRNEYYYLTAI------PYTLDEYKRYFQPL---IKEDDKSFRDGMR-----------------------------NSKKQLKDKSRPYVVT--------------TLFSTKDNFTKDNTIDEMIDFSEVLKKKKNIPHDLNVSLQIS-NKYIN--------TKRPNYSKKEVI--EVGVFNHE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QPV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 23200 for 2113 contacts (11.0/contact) +
2D Compatibility (PS) -27224 + (NN) 3810 + (LL) 8136
1D Compatibility (HY) -800 + (ID) 2750
Total energy: 4372.0 ( 2.07 by residue)
QMean score : 0.207
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