Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------MLKVSVITACFNSEKTIEDTILSVLNQTYK-NIEYIIIDGASADSTLEIIQK-----YKDRIACVMSEKDEGIYDAMNKGIKRSSGDIIALLNSDDFYKDEFVVEKVVHEFENKNCDSVYGDLGVVKPDCLEKVVRYYESGEFSPKTLLYGVVPAHPTLFVKKAIYERYGLYKTDYKISADFEMIIRLFVVQKISFSYLKEVLV-IMRTGGVSASGFKSLLLRNKENLRACQENGIQANVFSMLLKYPRKIMGLFKRESKGSLKRND-------- |
| 3CKJ Chain:A ((15-329)) | GLRDTRPGDTWLADRSWNRPGWTVAELEAAKAGRTISVVLPALDEEDTIGSVIDSISPLVDGLVDELIVLDSGSTDDTEIRAVAAGARVVSREQALPEVPIRPGKGEALWRSLAASRGDIVVFVDSDLINPHPMFVPWLVGPLLTGDGVHLVKSFYRRPGRVTELVARPLLAALR--PELGCILQPLGGEYAATRELLTSVPFAP-----GYGVEIGLLVDTFDRLGLDAIAQVNLGVREHRNRPLAELGAMSRQVIATLLSRCGIPDSGVGLTQFVADGPEGQSYTQHTWPVSLADRPPMQAIRPR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CKJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -86168 for 2063 contacts (-41.8/contact) +
2D Compatibility (PS) -26649 + (NN) -8195 + (LL) 168
1D Compatibility (HY) -5600 + (ID) 1700
Total energy: -128144.0 ( -62.12 by residue)
QMean score : 0.325
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