Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKENLPIVFGPVLSRRFGKSLGVDLSPSKKQCNYNCIYCELGK-AKPIERMEEVIKVETLISTIQNALNNLTTPIDVLTITAN-GEPTLY--PHLLELIQSIKPFLKGVKTLILSNGSLFYEPKVQQALK-EFDIVKFSLDAIDLKAFERVDKPYSKDINKILEGILSFSQIYQGQLVAEVLLIKGVNDSANNLKLIADFLKKIN--TARVDLSTIDRPSSFK---APKLSEDELLKCSLFFEGLCVSLPKRSTAQAKKLVSCGIDELLALISRRPLSAEEAPLILDPNAFKHLETLLNHKQITIKKVGSLEFYCAF |
| 1R30 Chain:A ((72-276)) | ---------------------------KT-GACPEDCKYCPQSSRYKTGLEAERLMEVEQVLESARKAKA---AGSTRFCMGAAWKNPHERDMPYLEQMVQGVKA--MGLEAC-MTLGTL-SESQAQRLANAGLDYYNHNLDT-SPEFYGNIIT--TRTYQERLDTLEKVRDA-GIKV--CSGGIVGLGETVKDRAGLLLQLANLPTPPESVPINMLVKVKGTPLADNDDVDAFDFIRTIAVARIMMPTSYVRLSAGREQMNEQTQAMCFMAGANSIFYGCKLLTTPNPEEDKDLQLFRKLGLNPQQT---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R30.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -81056 for 1490 contacts (-54.4/contact) +
2D Compatibility (PS) -20793 + (NN) -9745 + (LL) 3524
1D Compatibility (HY) -5200 + (ID) 1400
Total energy: -114670.0 ( -76.96 by residue)
QMean score : 0.451
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