Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYRRLLLNLFCMVFLQACLKPMSDPKAEKVDSQVQCGFGSKDC
1COZ Chain:A ((4-15))
------------VITYGTFDLLHWGHIKLLERAKQLGDYLVVA
General information:
TITO was launched using:
RESULT:
Template:
1COZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -371 for 25 contacts (-14.8/contact) +
2D Compatibility (PS) -1215 + (NN) -418 + (LL) 1520
1D Compatibility (HY) -800 + (ID) 50
Total energy: -1334.0 ( -53.36 by residue)
QMean score : -0.046
(partial model without unconserved sides chains):
PDB file :
Tito_1COZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1COZ-query.scw
PDB file :
Tito_Scwrl_1COZ.pdb
: