Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MKVNF------------FATCLGAAIYSNASLNAIKLLRKENLEVVFKKDQTCCGQPSYNSGYYEETKKVVLYNIKLYSNNDYPIILPSGSCTGMMRHDY-LELFEGHAEFNMVKDFCSRVYELSEFLDKKLQVKYEDKG---------EPLKITWHSNCHALRV--AKVIDSAKNLIRQLKNVELIELEKEEEC-----CGFGGTFSVKEPEISAVMVKEKIKDIESRHVDVIVSADAGCLMNISTAMQKMGSLTKPMHFYDFL----ASRLGL-------- |
| 4LL1 Chain:A ((5-296)) | IKSFEVVFNDPEKVYGSGEKVAGRVIVEVCEVTRVKAVRILACGVAKVLWMQGSQQCKQTSE----YLRYEDTLLLEDQPTGENEMVIMRPGNK----YEYKFGFELPQGPLGTSFKGKYGSVDYWVKAFLDRPSQPTQETKKNFEVVPDLMAPVSAKKEKKVSSMFIPDGRVSVSARIDRKGFCEGDEISIHADFENTSSRIVVPKAAIVARHTYLANGQTKVLTQKLSSVRGNHIISGTCASWRGKSLRVQKINILRVEYSLLIYVSVPGSKKVILDLPLVIGS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LL1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -33939 for 1598 contacts (-21.2/contact) +
2D Compatibility (PS) -23035 + (NN) 22352 + (LL) -44
1D Compatibility (HY) -8400 + (ID) 2000
Total energy: -45066.0 ( -28.20 by residue)
QMean score : -0.024
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