Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ---MEFYQVYDPLGHIWLS--ALVALSPIALFFISLIVFKLKGYSAGFLSLALSILIALFVYKMPVQMVSASFFYGFLYGLWPIAWIVIAAIFLYNLSVKSGYFEILKESILSLTPDHRILVILIGFCFGSFLEGAIGFGGPVAITAAILVGLGLNPLYAAGLCLIANTAPVAFGAVGIPITAMASVVGIPELEISQMVGRVLPIFSIGIPFFIVFLMDGFRGIRETFPAVAVTGFSFAIAQFLSSNYLGPQLPDIISALVSLVATTLFLKFWQPKHIFTSNGKEPTISTEKHHICKVVVAWMPFVLLTITIIIWTQPWFKALFKEGGALAFSNFAFEFNSISQKIFKTVPIVTEATNFPVVFKLPLILTTGTSIFLAALLS-VFLLRVKISDAIGVFGATLKEMRLPILTIGVVLAFAYVANYSGMSATLALALADTGHVFTFLSPMVGWLGV-FLTGSDTSSNLLFGSLQMLIATQLGLPEVLFLAANTSGGVVGKMISPQSIAIACAAVGLVGKESELFRFTVKYSIALAIIMGIVFTL---IAYVFPFIIPVTPT- |
1MRO Chain:B ((1-442)) | AKFEDKVDLYDDRGNLVEEQVPLEALSPL--------------RNPAIKSIVQGIKRTVAVN---LEGIENALKTAKVGGPACK---IMGRELDLDIVGNAESIAAAAKEMIQVTEDDDTNVELLG-------------GGKRALVQVPSARFDVAAEYS----------AAPLVTATAFVQAIINEFDVSMYDANMVKAAVLGRYP------------------------------------QSVEYMGANIATMLDIPQKLEGPGYALRNIMVNHVVAATLKN-------------TLQAAALSTILEQTAMFEMGDAVGAFERMHLLGLAYQGMNADNLVFDLVKANG------------KEGTVGSVIADLVERALEDGVIKVEKELT-DYKVYGTDDLAMWNAYAAAGLMAATMVNQGAARAAQGVSSTLLYYNDLIEFET---GLPSVDFGKVEGTAVGFSFFSHSIYGGGGPGIFNGNHIVTRHSKG----------FAIPCVAAAMALDAGTQMFSPEATSGLIKEVFSQVDEFREPLKYVVEAAAEIKNEI |
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General information:
TITO was launched using:
| RESULT:
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Template: 1MRO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -503412 for 3941 contacts (-127.7/contact) +
2D Compatibility (PS) -43087 + (NN) 4846 + (LL) 9696
1D Compatibility (HY) -4000 + (ID) 3100
Total energy: -539057.0 ( -136.78 by residue)
QMean score : 0.292
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