Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEFHQVYDPLGNIWLSALVALLPI-LLFFLSLMVFKLKGYTAAFLSVALSAIIAVLVYKMPVSMVGSSFLYGFLYGLWPIAWIIIAAIFLYKLSVKSGYFEILKESVQSITLDHRILVILIGFCFGSFLEGAIGFGGPIAITAAILVGLGLSPLYSAGLCLIANTAPVAFGAVGIPISAMASAVGVPAILISAMTGKILFFVSLLVPFFIVFLMDGFKGIKETFPAVFIAAFSFAGAQFLSSNYLGPELPGIISALVSLVATALFLKFWQPKTIFRSDGKAISFTKTNHHICKIYVAWSPFVILVLVIVLWIQPFFKALFEKDGLLAFSNFYFEFNNISNHIFKSPPFVEANQSVNFPVVFKLLLINTVGTSIFLAALVSMLVLRVRVSDALSVFGETLKEMRYPILTIGLVLSFAYVSNYSGISSTLALALTHTGLAFTFFSPLIGWVGVFLTGSDTSSNLLFGSLQQLTAQRLHLPEVLTLTANTVGGTLGKMIS---PQSIAIACAAVGLAGKESDLFKFTVKYSLIFVAIM-------GVVISAIAYWIPEVVPAIK |
| 1CJD Chain:A ((15-383)) | ---LRNQQAMAANLQARQIVLQQSYPVIQQVETQTFDPANRSVFDVTPANVGIVKGFLVKVTAAITNNHATEAVALTDFGPANLVQRVIYY--------------------DPDNQRHTETSGWHLHFVNTAKQG-----------------APFLSS----MVTDSPIKYGDVMNVIDA-------PATIAAGATGELTMYYWVPLA------------------------------------YSETDLTGAVLANVPQSKQRLKLEFANNNTAFAAVGA------------------NPL---------------EAIYQGAGAAD-----CEFEEISYTVYQS--YLD-----QLPVGQN-------GYILPLIDLSTLYNLENSAQA-------------------GLTPNVDFVVQYANLY------------------RYLSTIAVFDNGGSFNAGTDINYLSQRTA---NFSDTRKLDPKTWAAQTRRRIATDFPKGVYYCD--------NRDKPIYTLQYGNVGFVVNPKTVNQNARLLMGYEYFTSR------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1CJD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -435473 for 2873 contacts (-151.6/contact) +
2D Compatibility (PS) -37384 + (NN) 2273 + (LL) 17216
1D Compatibility (HY) -7200 + (ID) 3300
Total energy: -463868.0 ( -161.46 by residue)
QMean score : 0.057
|
|
|