Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGFLKVLKHDALGQVGNIVIGNFLITLTVLAVCFSSQSAEETTMLTLSYTLFFILGAFLLVAISVGAIKNLNALFSKRGVLSFSLPISLESLLLPKILLPMVFFIFSLFWFVASVRLGYYLFNAQSSVLFILHTALKTFALKPTKTIGVALFLGLVLMKFLFVLSVLNATRIKKARFLLGGLLFILVGVVLELAFNSLLPLMSSSLSINEGFYYFLQQQELQENKYYLLWGVDFLKILLLYGVIRYLLTHKLELD |
2LN3 Chain:A ((1-83)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------MGLTRTITSQNKEELLEIALKFISQGLDLEVEFDS-----TDDKEIEEFERDMEDLAKKTGVQIQKQWQGNKLRIRLKGSLEHHHHHH----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LN3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -54810 for 552 contacts (-99.3/contact) +
2D Compatibility (PS) -8820 + (NN) 2321 + (LL) 16420
1D Compatibility (HY) 3600 + (ID) 900
Total energy: -42189.0 ( -76.43 by residue)
QMean score : 0.208
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