Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLSRDIVQYSKIRTELYAYLTYLFSHNIRNHLPEITLDYLNRQISKM--QAEIKMAKSFFVLDAKGMLMLKPSQFKEQGHKEGLLEHDLTEGIELESHVSFSDKYYF-YQAVNEKRCILTDPYPS-KKGNHLVVSASYPVYDQ-NNDLAFVVCLQIPLRVAIEISSPSKYFKTFSEGSMVMYFMISIMLTLVSLLLFVKCISSFWTAIVHFSSFDIKEVFHPIVLLTLALATFDLVKAIFEEEVLGKNSGDNHHAIHRTMIRFLGSIIIALAIEALMLVFKFSVSEPDKITYAVYLAIGVAVLLISLAIYVKFAYSVLPKRER |
| 3C38 Chain:A ((91-203)) | ----------------------------------RDSSRLDEFFSSVDELELSNAPDLRFISSHDNILWDDGNAS-F-------------------YGIAQQELNKLIRRVAISGN-WHLVQTPSEGKSVHILM-RRSSLIEAG-GQVVGYLYVGIVLNDNFALLENIRSGSNSENLVLAVDTTPLVSTLKGNEPYSLDYVVHSAKDADSFIVGQTFLEVESVPTYLCVYSIQTN---------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C38.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -47661 for 695 contacts (-68.6/contact) +
2D Compatibility (PS) -10912 + (NN) 3749 + (LL) 12528
1D Compatibility (HY) -2400 + (ID) 500
Total energy: -45196.0 ( -65.03 by residue)
QMean score : 0.196
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