Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------MRDYSELEIFEGNPLDKWNDIIFHASKKLSKKELERLLEL-LALLETFI----EKEDLEERFESFAKALRMDEELQQKIESRKTDIVIQSMANILSGNE----------------------------------------------------------------------------------------- |
| 4PMO Chain:A ((24-234)) | NLYFQGGSLGTLLDYAAGVIPASQIRAAGAVGAIRYVSD-----RRPGGAWML-----GKPIQLSEARDLSGNGLKIVSCYQYGKGSTADWLGGASAGVQHARRGSELHAAAGGPTSAPIYASIDDNPSYEQYKNQIVPYLRSWESVIGHQRTGVYANSKTIDWAVNDGLGSYFWQHNWGSPKGYTHPAAHLHQVEIDKRKVGGVGVDVNQILKPQFGQWA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PMO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 21607 for 497 contacts (43.5/contact) +
2D Compatibility (PS) -9261 + (NN) -5293 + (LL) 1448
1D Compatibility (HY) -400 + (ID) 700
Total energy: 7401.0 ( 14.89 by residue)
QMean score : 0.240
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