Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTFEILKHLQADAIVLFMKVHNFHWNVKGTDFFNVHKATEEIYEGFADMFDDLAERIVQLGHHPLVTLSEAIKLTRVKEETKTSFHSKDIFKEILEDYKHLEKEFKELSNTAEKEGDKVTVTYADDQLAKLQKSIWMLEAHLA
1JI4 Chain:E ((1-144))
MKTFEILKHLQADAIVLFMKVHNFHWNVKGTDFFNVHKATEEIYEEFADMFDDLAERIVQLGHHPLVTLSEAIKLTRVKEETKTSFHSKDIFKEILEDYKYLEKEFKELSNTAEKEGDKVTVTYADDQLAKLQKSIWMLQAHLA
General information:
TITO was launched using:
RESULT:
Template:
1JI4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41239 for 1070 contacts (-38.5/contact) +
2D Compatibility (PS) -15714 + (NN) -10798 + (LL) 0
1D Compatibility (HY) -20400 + (ID) 7050
Total energy: -95201.0 ( -88.97 by residue)
QMean score : 0.635
(partial model without unconserved sides chains):
PDB file :
Tito_1JI4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JI4-query.scw
PDB file :
Tito_Scwrl_1JI4.pdb
: