Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNSVFIKGLSLSVLLLFGVFLKASENTTLNPSNVSVEEQKRFGGVLVFARGADGSSMDPALVTDGESYVATGNIYDTLVQFKYGTTEVEPALATSWEISPDGLVYTFHLRKGVYFHQTKYWNKKVEFSAKDVLFSFERQMDKAKRYYSPGAKSYKYWEGMGMSHIIKSIEALDDYTIRFTLNGPEAPFLANLGMDFLSILSKDYADYLAQNNKKDELAKKPVGTGPFKFFLWNKDEKIILVKNQDYWG-PKAYLDKVVVRTIPNSSTRALALRTGEIMLMTGPNLNEVEQLEKLPNIVVDRSPGLIANWLSLNTQKKYFNNPLVRLAINHAINVDDYIKVIYEGFAQKMVNPFPPTIWGYNYNIKPYEYDLKKAKELLKQAGYPNGFKTTIFTTST--RNPKGAVFIQASLAKIGIDVKIEVYEWGAYLKRTG-----LGEHEMAFAGWMADIADPDNFLYTLWSKQAASAIPTQNGSFYKSDAFSDLLIKAKRVSDQKEREALYLKAQEIIHKDAPYVPLAYPYSVVPHLSKVKGYKTTGVSVNRFFKVYLEK |
| 1UQW Chain:A ((23-509)) | -----------------------------------------AAKDVVVAVGSNFTTLDPYDANDTLSQAVAKSFYQGLFGLDK-EMKLKNVLAESYTVSDDGITYTVKLREGIKFQDG-----T-DFNAAAVKANLDRASDPANHLKRH-----------NLYKNIAKTEAIDPTTVKITLKQPFSAFINILAHPATAMISPAALEKY----GKEI-GFYPVGTGPYELDTWNQTDFVKVKKFAGYWQPGLPKLDSITWRPVADNNTRAAMLQTGEAQFAFPIPYEQATLLEKNKNIELMASPSIMQRYISMNVTQKPFDNPKVREALNYAINRPALVKVAFAGYATPATGVVPPSIAYAQ-SYKPWPYDPVKARELLKEAGYPNGFSTTLWSSHNHSTAQKVLQFTQQQLAQVGIKAQVTAMDAGQRAAEVEGKGQKESGVRMFYTGWSASTGEADWALSPLFASQN-WPPTLFNTAFYSNKQVDDFLAQALKTNDPAEKTRLYKAAQDIIWQESPWIPLVVEKLVSAHSKNLTGFWIMPDTGFSFEDADLQ- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1UQW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -224819 for 4165 contacts (-54.0/contact) +
2D Compatibility (PS) -52048 + (NN) -26538 + (LL) 4448
1D Compatibility (HY) -16000 + (ID) 7200
Total energy: -322157.0 ( -77.35 by residue)
QMean score : 0.531
|
|
|