Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLNRIIEHMNAHHVEDMKGLLKKFGQVHHAENVAFKSVDPQGIVIGYNNNQTLRIEFNHEVKDPKDYKNAIIELCQSVEKTHDLKGVEEEVKAFRKDFDSVCLATLHPNGHVVCSYAPLMTDGKQYYIYVSEVAEHFAGLKNNPHNVEVMFLEDESKAKSAILRKRLRYKTNARFIERG-AEFDKAFDSFIEKTGGAGGIKTIRTMQDFHLIALDFKEGRFVKGFGQAYDILGDKIAYVGDKGNPHNFAHKK |
3TGV Chain:A ((3-139)) | --------------------------------------------------------------------------------------LEPEIKEFRQERKTLQLATVDAQGRPNVSYAPFVQNQEGYFVLISHIARHARNLEVNP-QVSIMMIEDETEAKQLFARKRLTFDAVASMVERDSELWCQVIAQMGERFGE--IIDGLSQLQDFMLFRLQPEQGLFVKGFGLEH----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TGV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -72642 for 966 contacts (-75.2/contact) +
2D Compatibility (PS) -15081 + (NN) -4700 + (LL) 6632
1D Compatibility (HY) -12800 + (ID) 2450
Total energy: -101041.0 ( -104.60 by residue)
QMean score : 0.513
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