Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKILVIQGPNLNMLGHRDPRLYGMVTLDQIHEIMQTFVKQGNLDVELEFFQTNFEGEIIDKIQESVGSDYEGIIINPGAFSHTSIAIADAIMLAGKPVIEVHLTNIQAREEFRKNSYTGAACGGVIMGFGPLGYNMALMAMVNILAEMKAFQEAQKNNPNNPNNPINNQK
2XB9 Chain:B ((1-156))
MKILVIQGPNLNMLGHRDPRLYGMVTLDQIHEIMQTFVKQGNLDVELEFFQTNFEGEIIDKIQESVGSDYEGIIINPGAFSHTSIAIADAIMLAGKPVIEVHLTNIQAREEFRKNSYTGAACGGVIMGFGPLGYNMALMAMVNILAEMKAFQEAQKNN------------
General information:
TITO was launched using:
RESULT:
Template:
2XB9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -114952 for 1199 contacts (-95.9/contact) +
2D Compatibility (PS) -17502 + (NN) -6966 + (LL) -856
1D Compatibility (HY) -24400 + (ID) 7800
Total energy: -172476.0 ( -143.85 by residue)
QMean score : 0.538
(partial model without unconserved sides chains):
PDB file :
Tito_2XB9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XB9-query.scw
PDB file :
Tito_Scwrl_2XB9.pdb
: